Lecture

Learning objectives

By the end of this lesson, we should be able to understand spatial proteomics technologies, how they can work, and begin analyzing some spatial proteomics data.

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Hands-on component

Our in-class hands-on component will involve analyzing a spatial proteomics dataset.

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Class Lesson Notes

Prof. Fan’s notes from class: genomic-data-visualization-Lesson_12.pptx (click to download)

Prof. Fan’s code from class: code-lesson-12.R (click to download)

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Homework Assignment

Analyze a CODEX dataset for HW6. Perform analyses and create a multi-panel data visualization with a corresponding ‘figure caption’ that describes your data visualization. See slides for more details on what is expected: genomic-data-visualization-HW_6.pptx (click to download)