Lecture

Learning objectives

By the end of this lesson, we should better understand how multi-cellular pixel-resolution spatial transcriptomics data can be deconvolved and how the resulting deconvolved results can be visualized.

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Hands-on component

Download the results deconvolution and visualize the results.

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Class Notes

Prof. Fan’s notes from class: genomic-data-visualization-Lesson_11.pptx (click to download)

Prof. Fan’s code from class: code-lesson-11.R (click to download)

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Homework Assignment

None. Complete HW5 if you have not done so already.